Those are pretty much the top three chemistries off the top of my head, WWF/WWE only. Molly Holly, Ivory, and Victoria all had some great matches with various women but nothing every stuck out as pure chemistry to me.
Lita/Trish is obvious promos and wrestling and being over and everything, just the two GOATS. But a huge a shoutout to Victoria/Trish that Hardcore match, and my favorite the Chicago Street Fight match where great.
Gail Kim/Victoria also had some great matches in WWE and TNA.
Melina/Mickie had amazing backstage segments and some great matches ( even on WWE HEAT !)
Also, A shout-out to the best WWE Female wrestler of the past 20 years, Beth Phoenix the girl gave many girls their best match ( top 3 at least), she had a talent of bringing out the best of anyone ( Melina, Mickie, Eve, Kelly Kelly, Maria, Layla, Katie Lea in OVW, Tamina Snuka , and even Maryse had her breakout performance vs Beth Survivor Series 2008 I think)